C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 90B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085017 Ccdc90b-002 ENSMUSG00000030613 10090 + 7:92561149-92582294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000085017
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000085017 6.563±3.47 2.854±0.00 1.850±0.73 0.816±0.00 1.194±0.07 1.221±0.32 1.101±0.00 1.006±0.00 2.390±0.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260054 CCDC90B-002 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000455220 CCDC90B-003 protein_coding Homo_sapiens 0 409
ENST00000514414 RP11-629B11.4-001 processed_pseudogene Homo_sapiens 0 222
ENST00000525503 CCDC90B-006 protein_coding Homo_sapiens 0 409
ENST00000525504 CCDC90B-019 processed_transcript Homo_sapiens 0 237
ENST00000527025 CCDC90B-011 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000528149 CCDC90B-010 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000529073 CCDC90B-017 protein_coding Homo_sapiens 0 268
ENST00000529312 CCDC90B-013 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000529611 CCDC90B-004 protein_coding Homo_sapiens 0 409
ENST00000529689 CCDC90B-001 protein_coding Homo_sapiens 0 409
ENST00000529745 CCDC90B-009 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000529856 CCDC90B-008 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000533761 CCDC90B-007 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000534753 CCDC90B-012 nonsense_mediated_decay Homo_sapiens 0 309

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