C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dishevelled associated activator of morphogenesis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085299 Daam1-201 ENSMUSG00000034574 10090 + 12:71831078-71992367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085299 3.602±0.68 1.317±0.35 6.601±1.32 13.086±7.18 2.390±0.38 4.810±0.43 4.379±2.41 1.913±0.32 5.434±1.63 9.098±0.19 0.255±0.07 2.524±0.81 4.895±0.68 1.610±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Q5 CIL_0007Q5_0002 VISTA 12:71232268-71832268
CIL_0001K5 CIL_0001K5_0002 CGP 12:71309884-71992367
CIL_0001K2 CIL_0001K2_0002 CGP 12:71831078-72070991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016020 IEA membrane
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024726 daam1a-001 protein_coding Danio_rerio 0 918
ENST00000360909 DAAM1-007 protein_coding Homo_sapiens 0 2586
ENST00000395125 DAAM1-001 protein_coding Homo_sapiens 0 4309
ENST00000553307 DAAM1-010 retained_intron Homo_sapiens 0 1182
ENST00000553472 DAAM1-012 retained_intron Homo_sapiens 0 377
ENST00000553966 DAAM1-009 processed_transcript Homo_sapiens 0 811
ENST00000554459 DAAM1-006 processed_transcript Homo_sapiens 0 676
ENST00000555651 DAAM1-004 retained_intron Homo_sapiens 0 813
ENST00000556894 DAAM1-015 retained_intron Homo_sapiens 0 425
ENST00000557029 DAAM1-014 processed_transcript Homo_sapiens 0 503
ENST00000557327 DAAM1-005 processed_transcript Homo_sapiens 0 339
ENST00000557628 DAAM1-013 retained_intron Homo_sapiens 0 503

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