C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ninein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085314 Nin-001 ENSMUSG00000021068 10090 - 12:70011435-70102833 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000085314
Transcript ID Adrenal Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000085314 0.545±0.09 1.413±0.00 1.014±0.07 1.418±0.00 0.582±0.00 0.469±0.27 0.859±0.35 4.090±0.94 1.935±0.98 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069L CIL_00069L_0003 CGP 12:69965012-70111925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 ISO spindle pole
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0034454 IMP microtubule anchoring at centrosome
GO:0090222 IMP centrosome-templated microtubule nucleation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245441 NIN-201 protein_coding Homo_sapiens 0 2856
ENST00000324330 NIN-202 protein_coding Homo_sapiens 0 2215
ENST00000382041 NIN-016 protein_coding Homo_sapiens 0 2856
ENST00000382043 NIN-010 protein_coding Homo_sapiens 0 2215
ENST00000389869 NIN-019 protein_coding Homo_sapiens 0 2139
ENST00000453196 NIN-203 protein_coding Homo_sapiens 0 2856
ENST00000453401 NIN-008 protein_coding Homo_sapiens 0 1395
ENST00000463419 NIN-011 retained_intron Homo_sapiens 0 305
ENST00000476352 NIN-003 nonsense_mediated_decay Homo_sapiens 0 2856
ENST00000485005 NIN-009 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000486200 NIN-013 processed_transcript Homo_sapiens 6e-37 158
ENST00000486950 NIN-012 protein_coding Homo_sapiens 0 335
ENST00000496749 NIN-004 protein_coding Homo_sapiens 0 355
ENST00000530853 NIN-018 protein_coding Homo_sapiens 0 2008
ENST00000530997 NIN-017 protein_coding Homo_sapiens 0 2856
ENST00000555984 NIN-020 retained_intron Homo_sapiens 0 383

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