C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histidine rich calcium binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085351 Hrc-001 ENSMUSG00000038239 10090 + 7:45335290-45338973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085351 0.194±0.05 0.086±0.06 0.320±0.05 0.477±0.14 15.256±15.63 2.319±1.65 197.777±15.63 0.833±0.72 0.141±0.16 3.530±2.08 207.205±16.31 1.063±0.32 1.089±1.50 0.173±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002027 IEA regulation of heart rate
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0008016 IDA regulation of heart contraction
GO:0010460 IEA positive regulation of heart rate
GO:0010880 IEA regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0030018 IEA Z disc
GO:0033017 IDA sarcoplasmic reticulum membrane
GO:0033135 IEA regulation of peptidyl-serine phosphorylation
GO:0044325 IEA ion channel binding
GO:0045823 IEA positive regulation of heart contraction
GO:0051117 IEA ATPase binding
GO:0051480 IEA cytosolic calcium ion homeostasis
GO:0055074 IDA calcium ion homeostasis
GO:0060314 IEA regulation of ryanodine-sensitive calcium-release channel activity
GO:1901844 IEA regulation of cell communication by electrical coupling involved in cardiac conduction
GO:1901899 IEA positive regulation of relaxation of cardiac muscle
GO:1903169 IEA regulation of calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252825 HRC-001 protein_coding Homo_sapiens 0 353
ENST00000595167 HRC-004 retained_intron Homo_sapiens 2e-31 139
ENST00000595625 HRC-002 protein_coding Homo_sapiens 8e-32 143
ENST00000598858 HRC-003 protein_coding Homo_sapiens 7.9874e-44 180

Loading