C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lin-9 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085803 Lin9-201 ENSMUSG00000058729 10090 + 1:180641150-180690518 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085803 0.936±0.07 0.497±0.13 1.262±0.11 2.691±1.53 1.212±0.40 0.741±0.22 0.689±0.18 1.141±0.15 1.778±1.34 0.613±0.14 1.101±0.22 1.832±0.73 3.283±1.41 4.018±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MQ CIL_0005MQ_0002 CGP 1:180641150-180697034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0017053 IEA transcriptional repressor complex
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328205 LIN9-001 protein_coding Homo_sapiens 0 2830
ENST00000359525 LIN9-004 protein_coding Homo_sapiens 0 481
ENST00000366808 LIN9-002 protein_coding Homo_sapiens 0 2599
ENST00000460719 LIN9-003 protein_coding Homo_sapiens 0 2270
ENST00000481685 LIN9-005 protein_coding Homo_sapiens 0 1568

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