C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5'-nucleotidase, cytosolic II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086961 Nt5c2-201 ENSMUSG00000025041 10090 - 19:46886831-46969474 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000086961
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000086961 2.373±0.00 6.872±2.20 5.500±2.28 3.828±1.44 5.806±2.97 1.451±0.61 3.151±0.00 7.544±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0002 VISTA 19:46318498-46919738
CIL_0001Q7 CIL_0001Q7_0004 CGP 19:46761596-47015153
CIL_0000EX CIL_0000EX_0003 CGP 19:46886831-47025327

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008253 IEA 5'-nucleotidase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343289 NT5C2-201 protein_coding Homo_sapiens 0 2313
ENST00000369857 NT5C2-012 processed_transcript Homo_sapiens 0 1506
ENST00000404739 NT5C2-001 protein_coding Homo_sapiens 0 2313
ENST00000421281 NT5C2-009 protein_coding Homo_sapiens 0 479
ENST00000452156 NT5C2-002 nonsense_mediated_decay Homo_sapiens 0 1011
ENST00000458345 NT5C2-005 protein_coding Homo_sapiens 0 571
ENST00000461461 NT5C2-003 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000469228 NT5C2-006 retained_intron Homo_sapiens 0 226
ENST00000470228 NT5C2-007 retained_intron Homo_sapiens 0 520
ENST00000481549 NT5C2-008 processed_transcript Homo_sapiens 0 523
ENST00000487810 NT5C2-004 processed_transcript Homo_sapiens 0 675
ENST00000552185 NT5C2-013 nonsense_mediated_decay Homo_sapiens 0 521

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