C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NIPA-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087212 Nipal1-201 ENSMUSG00000067219 10090 + 5:72647796-72671078 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087212
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087212 0.244±0.19 0.146±0.05 4.565±0.73 0.085±0.02 0.637±0.32 5.565±0.74 0.016±0.00 0.458±0.04 4.485±3.53 1.974±0.55 0.025±0.01 1.819±0.71 2.213±2.50 0.171±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RD CIL_0008RD_0002 VISTA 5:72193972-72795406

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IDA magnesium ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295461 NIPAL1-001 protein_coding Homo_sapiens 0 1273
ENST00000440642 RP4-738P15.4-001 processed_pseudogene Homo_sapiens 0 749
ENST00000508180 NIPAL1-010 processed_transcript Homo_sapiens 0 715
ENST00000511852 NIPAL1-019 nonsense_mediated_decay Homo_sapiens 0 529

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