C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Kv channel interacting protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087395 Kcnip4-001 ENSMUSG00000029088 10090 - 5:48389502-49524904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungOvaryENSMUST00000087395
Transcript ID Adrenal Brain Lung Ovary
ENSMUST00000087395 0.248±0.00 4.239±3.51 0.269±0.00 0.207±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ON CIL_0002ON_0002 CGP 5:48372392-49524904
CIL_00033U CIL_00033U_0003 CGP 5:48389502-50058996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005267 IEA potassium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0016020 IEA membrane
GO:0030425 IEA dendrite
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043025 IEA neuronal cell body
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359001 KCNIP4-201 protein_coding Homo_sapiens 0 1328
ENST00000382148 KCNIP4-001 protein_coding Homo_sapiens 0 1328
ENST00000382149 KCNIP4-008 processed_transcript Homo_sapiens 0 909
ENST00000382150 KCNIP4-002 protein_coding Homo_sapiens 0 1020
ENST00000382152 KCNIP4-004 protein_coding Homo_sapiens 0 1343
ENST00000447367 KCNIP4-003 protein_coding Homo_sapiens 0 1020
ENST00000509207 KCNIP4-009 protein_coding Homo_sapiens 0 989
ENST00000515373 KCNIP4-005 retained_intron Homo_sapiens 0 351
ENST00000515786 KCNIP4-006 nonsense_mediated_decay Homo_sapiens 0 828

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