C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family A member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087622 Plekha5-201 ENSMUSG00000030231 10090 + 6:140424099-140594906 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087622 3.778±2.07 1.072±0.32 2.458±0.65 7.369±1.76 1.750±0.11 3.930±0.86 2.677±0.55 0.804±0.04 1.287±0.67 2.631±1.29 0.239±0.10 3.858±1.20 1.712±0.53 3.231±1.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FI CIL_0005FI_0002 CGP 6:140041557-140594906
CIL_0005FL CIL_0005FL_0002 CGP 6:140424099-140678472

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 IDA cytosol
GO:0010314 IDA phosphatidylinositol-5-phosphate binding
GO:0016020 IEA membrane
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0061458 IGI reproductive system development
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000067414 plekha5-201 protein_coding Danio_rerio 0.000000000000003 90
ENSDART00000112210 plekha5-202 protein_coding Danio_rerio 0.000000000000003 90
ENSDART00000155168 plekha5-203 protein_coding Danio_rerio 0.000000000000003 90
ENSDART00000127894 plekha5-001 protein_coding Danio_rerio 0.000000000000003 90
ENST00000299275 PLEKHA5-002 protein_coding Homo_sapiens 0 1929
ENST00000424268 PLEKHA5-201 protein_coding Homo_sapiens 0 1589
ENST00000429027 PLEKHA5-004 protein_coding Homo_sapiens 0 3847
ENST00000510738 PLEKHA5-003 processed_transcript Homo_sapiens 0 1312
ENST00000536974 PLEKHA5-005 protein_coding Homo_sapiens 0 1591
ENST00000537027 PLEKHA5-012 retained_intron Homo_sapiens 3e-20 102
ENST00000538068 PLEKHA5-010 retained_intron Homo_sapiens 0 579
ENST00000538677 PLEKHA5-007 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000538714 PLEKHA5-001 protein_coding Homo_sapiens 0 2185
ENST00000539256 PLEKHA5-202 protein_coding Homo_sapiens 0 1175
ENST00000540972 PLEKHA5-011 protein_coding Homo_sapiens 0 374

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