C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aquaporin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088200 Aqp5-201 ENSMUSG00000044217 10090 + 15:99590849-99594608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088200
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088200 0.154±0.00 0.308±0.16 0.180±0.02 30.480±15.37 0.046±0.00 0.931±0.72 0.235±0.16 0.049±0.04 56.000±5.47 0.075±0.00 3.738±1.69 0.063±0.02 0.249±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_00071Z CIL_00071Z_0002 CGP 15:99579056-99594829
CIL_000720 CIL_000720_0002 CGP 15:99590849-99605477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0005902 IDA microvillus
GO:0006833 TAS water transport
GO:0009925 IDA basal plasma membrane
GO:0015250 TAS water channel activity
GO:0016324 IDA apical plasma membrane
GO:0046541 IMP saliva secretion
GO:0048593 IMP camera-type eye morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293599 AQP5-001 protein_coding Homo_sapiens 0 952
ENST00000553132 AQP5-002 retained_intron Homo_sapiens 0 316

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