C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088248 Ube2c-001 ENSMUSG00000001403 10090 + 2:164769898-164772907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000088248
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000088248 11.180±4.06 4.175±0.52 3.612±0.40 35.444±29.31 7.978±0.27 36.815±4.34 1.993±1.12 3.297±0.13 193.728±222.17 3.137±0.12 32.663±12.65 52.765±40.02 17.926±7.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002L CIL_00002L_0002 CGP 2:164745983-164778822
CIL_00002K CIL_00002K_0002 CGP 2:164769898-164779967

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005680 ISS anaphase-promoting complex
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0008054 IEA cyclin catabolic process
GO:0010458 ISS exit from mitosis
GO:0010994 ISS free ubiquitin chain polymerization
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0031145 ISS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031536 IEA positive regulation of exit from mitosis
GO:0070936 ISS protein K48-linked ubiquitination
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000561405 UBE2CP4-001 processed_pseudogene Homo_sapiens 0 449
ENST00000603829 CTD-2583A14.11-001 transcribed_processed_pseudogene Homo_sapiens 0 383
ENST00000604665 CTD-2583A14.11-002 processed_transcript Homo_sapiens 0 388

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