C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: muscleblind-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088419 Mbnl2-201 ENSMUSG00000022139 10090 + 14:120275669-120431697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088419
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088419 5.422±0.90 4.653±0.85 8.947±0.15 7.437±5.03 3.765±0.73 7.720±1.83 4.158±0.86 2.025±0.62 4.330±0.00 3.461±0.41 6.268±1.55 13.211±1.09 1.258±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FY CIL_0004FY_0003 CGP 14:120019585-120431697
CIL_00041S CIL_00041S_0002 CGP 14:120275669-120507194

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000381 IMP regulation of alternative mRNA splicing, via spliceosome
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343600 MBNL2-201 protein_coding Homo_sapiens 0 3554
ENST00000345429 MBNL2-001 protein_coding Homo_sapiens 0 3722
ENST00000376673 MBNL2-202 protein_coding Homo_sapiens 0 3546
ENST00000397601 MBNL2-004 protein_coding Homo_sapiens 0 3554
ENST00000449284 MBNL2-003 protein_coding Homo_sapiens 0 839
ENST00000469707 MBNL2-002 nonsense_mediated_decay Homo_sapiens 0 1271

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