C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and calponin homology (CH) domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088970 Lrch1-201 ENSMUSG00000068015 10090 - 14:74754674-74947877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088970
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088970 3.078±1.53 1.759±1.22 7.197±0.79 2.253±0.90 4.231±1.11 3.513±1.75 2.063±0.79 1.706±0.83 0.952±0.33 8.808±3.08 0.267±0.26 3.402±1.70 4.950±3.33 0.549±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311191 LRCH1-002 protein_coding Homo_sapiens 0 1520
ENST00000389797 LRCH1-004 protein_coding Homo_sapiens 0 1520
ENST00000389798 LRCH1-001 protein_coding Homo_sapiens 0 1520
ENST00000443945 LRCH1-003 retained_intron Homo_sapiens 0 1373
ENST00000463929 LRCH1-005 protein_coding Homo_sapiens 0 540
ENST00000478412 LRCH1-006 protein_coding Homo_sapiens 0 448

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