C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 148
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089677 Zfp148-201 ENSMUSG00000022811 10090 + 16:33400445-33498643 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089677 4.217±0.57 1.204±0.22 4.297±0.28 3.293±0.71 3.033±1.39 2.560±0.59 1.594±0.25 2.102±0.41 1.613±0.69 2.534±0.37 1.527±0.22 5.106±1.19 7.011±1.76 1.795±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004V6 CIL_0004V6_0002 CGP 16:33251456-33503903
CIL_0004UH CIL_0004UH_0002 CGP 16:33380775-33664135

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007276 IMP gamete generation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360647 ZNF148-001 protein_coding Homo_sapiens 0 5254
ENST00000465763 ZNF148-007 protein_coding Homo_sapiens 0 603
ENST00000468369 ZNF148-003 protein_coding Homo_sapiens 0 837
ENST00000471196 ZNF148-009 protein_coding Homo_sapiens 0 340
ENST00000484491 ZNF148-004 protein_coding Homo_sapiens 0 3855
ENST00000485866 ZNF148-002 protein_coding Homo_sapiens 0 3542
ENST00000492394 ZNF148-005 protein_coding Homo_sapiens 0 3971
ENST00000495019 ZNF148-008 protein_coding Homo_sapiens 0 571
ENST00000497929 ZNF148-006 processed_transcript Homo_sapiens 0 2992
ENST00000544464 ZNF148-201 protein_coding Homo_sapiens 0 3066

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