C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HRAS-like suppressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089824 Hrasls-001 ENSMUSG00000022525 10090 + 16:29209695-29230531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000089824
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000089824 0.175±0.06 0.749±0.41 1.225±0.05 0.345±0.17 1.764±1.55 0.217±0.06 4.260±1.40 0.316±0.11 0.015±0.01 0.400±0.29 17.669±2.87 0.316±0.26 0.065±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DT CIL_0000DT_0002 CGP 16:28826176-29230531
CIL_0000N6 CIL_0000N6_0002 CGP 16:29209695-29378732

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 TAS regulation of cell growth
GO:0004620 IDA phospholipase activity
GO:0005641 IDA nuclear envelope lumen
GO:0005737 IDA cytoplasm
GO:0005777 IDA peroxisome
GO:0007031 IDA peroxisome organization
GO:0007265 TAS Ras protein signal transduction
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:0016740 IEA transferase activity
GO:0046485 IDA ether lipid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264735 HRASLS-001 protein_coding Homo_sapiens 0 604
ENST00000416012 HRASLS-002 nonsense_mediated_decay Homo_sapiens 0 326

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