C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090180 Sema3g-001 ENSMUSG00000021904 10090 + 14:31217860-31230350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090180
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090180 9.753±2.97 6.614±1.02 2.242±0.31 1.150±0.55 4.908±2.00 1.840±0.18 2.693±0.33 16.225±3.87 0.085±0.04 44.970±12.62 2.545±0.39 16.846±4.18 6.395±5.77 0.374±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231721 SEMA3G-001 protein_coding Homo_sapiens 0 2486
ENST00000465657 SEMA3G-003 nonsense_mediated_decay Homo_sapiens 0 915
ENST00000475739 SEMA3G-002 protein_coding Homo_sapiens 0 368

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