C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: meiosis arrest female 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090300 Marf1-201 ENSMUSG00000060657 10090 - 16:14109166-14159274 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090300
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090300 7.633±2.33 12.019±4.35 3.933±0.69 6.362±2.00 7.185±2.22 5.271±3.05 3.377±0.56 4.981±0.92 4.754±2.31 7.609±1.55 3.052±0.53 9.094±2.53 4.569±1.22 3.206±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UU CIL_0006UU_0002 CGP 16:13986604-14159274
CIL_0006UO CIL_0006UO_0002 CGP 16:14109166-14192928

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005777 IEA peroxisome
GO:0006302 IMP double-strand break repair
GO:0007143 IMP female meiotic division
GO:0010468 IMP regulation of gene expression
GO:0010923 ISS negative regulation of phosphatase activity
GO:0016020 IEA membrane
GO:0048477 IMP oogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000396368 KIAA0430-001 protein_coding Homo_sapiens 0 5638
ENST00000540441 KIAA0430-005 protein_coding Homo_sapiens 0 2878
ENST00000546864 KIAA0430-009 retained_intron Homo_sapiens 0 841
ENST00000548025 KIAA0430-003 protein_coding Homo_sapiens 0 5517
ENST00000548216 KIAA0430-002 retained_intron Homo_sapiens 0 1173
ENST00000549219 KIAA0430-007 protein_coding Homo_sapiens 0 638
ENST00000549337 KIAA0430-014 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000551678 KIAA0430-010 processed_transcript Homo_sapiens 0 339
ENST00000551742 KIAA0430-004 protein_coding Homo_sapiens 0 5581
ENST00000551878 KIAA0430-015 nonsense_mediated_decay Homo_sapiens 0 355
ENST00000552535 KIAA0430-012 retained_intron Homo_sapiens 0 359
ENST00000552553 KIAA0430-017 nonsense_mediated_decay Homo_sapiens 0 3317
ENST00000552771 KIAA0430-006 retained_intron Homo_sapiens 0 366
ENST00000621511 KIAA0430-201 protein_coding Homo_sapiens 0 5638

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