C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G kinase anchoring protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091579 Gkap1-201 ENSMUSG00000021552 10090 - 13:58233351-58274188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091579
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091579 2.365±1.20 20.685±2.14 9.969±2.65 13.171±4.54 2.021±0.69 1.808±0.98 1.731±0.34 5.896±1.18 2.727±1.23 4.258±1.54 7.723±0.48 15.075±20.75 73.421±78.91 69.620±12.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XO CIL_0000XO_0002 CGP 13:58176156-58274188
CIL_0006E9 CIL_0006E9_0002 CGP 13:58233351-58354862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0007165 IDA signal transduction
GO:0007199 TAS G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376362 GKAP1-003 processed_transcript Homo_sapiens 0 399
ENST00000376365 GKAP1-002 protein_coding Homo_sapiens 0 610
ENST00000376371 GKAP1-001 protein_coding Homo_sapiens 0 1338

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