C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HMG box domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091884 Hmgxb3-201 ENSMUSG00000024622 10090 - 18:61131279-61177050 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091884
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091884 7.784±1.67 11.599±1.73 6.401±0.25 6.385±1.94 9.187±1.45 9.467±1.25 3.023±1.32 5.473±1.50 3.571±1.08 9.102±1.01 1.322±0.38 11.252±3.17 7.376±0.58 4.408±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0002 VISTA 18:60604549-61207221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296736 TIGD6-001 protein_coding Homo_sapiens 0 361
ENST00000502717 HMGXB3-001 protein_coding Homo_sapiens 0 2937
ENST00000503427 HMGXB3-002 protein_coding Homo_sapiens 0 4796
ENST00000510472 HMGXB3-005 retained_intron Homo_sapiens 0 529
ENST00000514469 HMGXB3-004 nonsense_mediated_decay Homo_sapiens 0 800
ENST00000613459 HMGXB3-201 protein_coding Homo_sapiens 0 2937

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