C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, gamma subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092351 Cacng8-201 ENSMUSG00000053395 10090 + 7:3394117-3415605 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000092351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000092351 0.069±0.03 0.482±0.00 0.095±0.00 5.702±0.62 0.190±0.18 0.037±0.01 0.060±0.04 0.030±0.03 0.079±0.06 0.186±0.11 0.081±0.01 2.177±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PD CIL_0005PD_0002 CGP 7:3332955-3415648
CIL_0001VE CIL_0001VE_0002 CGP 7:3390683-3435667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005244 IEA voltage-gated ion channel activity
GO:0005262 IEA calcium channel activity
GO:0016021 IEA integral component of membrane
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000103894 cacng8b-001 protein_coding Danio_rerio 0 255
ENSDART00000155602 cacng8b-201 protein_coding Danio_rerio 0 220
ENST00000270458 CACNG8-001 protein_coding Homo_sapiens 0 1663

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