C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5'-nucleotidase, cytosolic IIIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092688 Nt5c3b-201 ENSMUSG00000017176 10090 - 11:100429353-100441089 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092688 17.281±7.81 20.377±2.96 57.918±4.99 32.884±4.00 10.911±0.93 9.281±0.68 11.175±1.48 8.907±0.59 6.124±4.56 10.949±0.26 2.173±0.98 36.501±3.06 10.835±5.96 29.366±16.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K6 CIL_0003K6_0003 CGP 11:100408456-100424824
CIL_0007BM CIL_0007BM_0002 CGP 11:100415697-100441808
CIL_00050F CIL_00050F_0002 CGP 11:100422321-100457022

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008253 IEA 5'-nucleotidase activity
GO:0009117 IEA nucleotide metabolic process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393910 NT5C3B-015 retained_intron Homo_sapiens 0 449
ENST00000415460 NT5C3B-009 protein_coding Homo_sapiens 0 455
ENST00000435506 NT5C3B-008 protein_coding Homo_sapiens 0 1044
ENST00000445655 NT5C3B-011 nonsense_mediated_decay Homo_sapiens 0 891
ENST00000460893 NT5C3B-006 retained_intron Homo_sapiens 0 409
ENST00000469698 NT5C3B-004 retained_intron Homo_sapiens 0 909
ENST00000470690 NT5C3B-005 retained_intron Homo_sapiens 0 909
ENST00000475053 NT5C3B-003 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000476921 NT5C3B-014 retained_intron Homo_sapiens 0 771
ENST00000481693 NT5C3B-012 retained_intron Homo_sapiens 0 403
ENST00000486304 NT5C3B-013 protein_coding Homo_sapiens 0 296
ENST00000495317 NT5C3B-010 retained_intron Homo_sapiens 1e-26 124
ENST00000517701 NT5C3B-016 retained_intron Homo_sapiens 0 769
ENST00000521789 NT5C3B-017 protein_coding Homo_sapiens 0 555
ENST00000523903 NT5C3B-001 retained_intron Homo_sapiens 0 1029

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