C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactory receptor 558
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094124 Olfr558-201 ENSMUSG00000070423 10090 + 7:102702331-102712054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094124
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094124 6.014±0.26 0.820±0.28 0.524±0.02 0.084±0.05 3.105±0.20 1.620±0.48 1.581±0.77 1.597±0.43 0.023±0.02 0.265±0.05 0.834±0.17 3.486±1.64 0.069±0.04 0.160±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R7 CIL_0003R7_000D CGP 7:102698216-102712054

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004984 ISA olfactory receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 ISA G-protein coupled receptor signaling pathway
GO:0007608 ISA sensory perception of smell
GO:0016021 ISA integral component of membrane
GO:0050911 IEA detection of chemical stimulus involved in sensory perception of smell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307632 OR52K1-001 protein_coding Homo_sapiens 6e-20 102
ENST00000325719 OR52K2-001 protein_coding Homo_sapiens 4e-17 94
ENST00000345043 OR52B6-001 protein_coding Homo_sapiens 0.000000002 68
ENST00000396952 OR51E1-001 protein_coding Homo_sapiens 0 1188
ENST00000531655 OR52K3P-001 unprocessed_pseudogene Homo_sapiens 4e-22 110

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