C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin Y-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094898 Ccnyl1-201 ENSMUSG00000070871 10090 + 1:64691345-64725640 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000094898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000094898 1.750±0.83 1.610±0.00 6.678±2.73 8.070±4.10 2.265±0.79 2.110±0.44 2.634±1.79 1.991±1.02 1.530±0.95 1.994±1.18 7.077±0.47 3.430±1.84 9.134±3.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YQ CIL_0006YQ_0002 CGP 1:64606473-64725644
CIL_0006YT CIL_0006YT_0002 CGP 1:64690455-64737751

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0019901 IEA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295414 CCNYL1-003 protein_coding Homo_sapiens 0 1456
ENST00000339882 CCNYL1-002 protein_coding Homo_sapiens 0 904
ENST00000392209 CCNYL1-001 protein_coding Homo_sapiens 0 1456
ENST00000420321 CCNYL1-006 protein_coding Homo_sapiens 0 621
ENST00000420822 CCNYL1-007 protein_coding Homo_sapiens 0.00000000000002 84
ENST00000426799 RP11-314A15.2-001 processed_pseudogene Homo_sapiens 0 1123
ENST00000452312 CCNYL1-004 nonsense_mediated_decay Homo_sapiens 0 682
ENST00000468768 CCNYL1-005 processed_transcript Homo_sapiens 0 422
ENST00000472090 CCNYL2-001 translated_unprocessed_pseudogene Homo_sapiens 0 494
ENST00000483242 CCNYL2-002 processed_transcript Homo_sapiens 0 263
ENST00000596710 RP11-420K14.6-002 processed_transcript Homo_sapiens 0 1242
ENST00000597012 RP11-420K14.6-001 transcribed_processed_pseudogene Homo_sapiens 0 1201
ENST00000623800 RP11-420K14.7-002 processed_transcript Homo_sapiens 0 1242
ENST00000624555 RP11-420K14.7-001 transcribed_processed_pseudogene Homo_sapiens 0 1201

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