C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095410 Wdr20-201 ENSMUSG00000037957 10090 + 12:110737949-110795028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095410 3.611±1.98 2.044±0.98 6.233±1.69 6.814±3.40 5.427±2.46 6.179±2.31 2.466±0.67 3.155±1.55 5.607±1.57 3.811±2.58 1.257±0.31 8.103±3.03 4.660±1.21 6.033±2.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001G1 CIL_0001G1_0002 CGP 12:110690605-110795028
CIL_0001G5 CIL_0001G5_0002 CGP 12:110737949-110840939

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112803 wdr20a-201 protein_coding Danio_rerio 0 833
ENST00000299135 WDR20-011 protein_coding Homo_sapiens 0 2678
ENST00000322340 WDR20-010 protein_coding Homo_sapiens 0 758
ENST00000335263 WDR20-003 protein_coding Homo_sapiens 0 2586
ENST00000342702 WDR20-001 protein_coding Homo_sapiens 0 3426
ENST00000424963 WDR20-201 protein_coding Homo_sapiens 0 1831
ENST00000454394 WDR20-019 protein_coding Homo_sapiens 0 2200
ENST00000555879 WDR20-007 nonsense_mediated_decay Homo_sapiens 0 2237
ENST00000555973 WDR20-006 processed_transcript Homo_sapiens 0 654
ENST00000556094 WDR20-009 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000556511 WDR20-004 protein_coding Homo_sapiens 0 2582
ENST00000556807 WDR20-002 protein_coding Homo_sapiens 0 1831
ENST00000557186 WDR20-008 processed_transcript Homo_sapiens 0 582
ENST00000557485 WDR20-005 processed_transcript Homo_sapiens 0 361
ENST00000558135 WDR20-014 processed_transcript Homo_sapiens 0 808
ENST00000558448 WDR20-015 processed_transcript Homo_sapiens 0 505
ENST00000558567 WDR20-016 protein_coding Homo_sapiens 0 745
ENST00000558854 WDR20-013 protein_coding Homo_sapiens 0 723
ENST00000559478 WDR20-018 protein_coding Homo_sapiens 0 231
ENST00000559708 WDR20-012 processed_transcript Homo_sapiens 0 660
ENST00000561154 WDR20-017 processed_transcript Homo_sapiens 0 507

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