C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leiomodin 3 (fetal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095655 Lmod3-201 ENSMUSG00000044086 10090 - 6:97238528-97252780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095655
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095655 0.076±0.03 0.054±0.00 0.048±0.02 0.038±0.01 2.343±2.47 0.052±0.02 16.578±1.63 0.321±0.29 0.081±0.10 0.753±0.55 30.411±6.77 0.108±0.08 0.069±0.05 0.061±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AZ CIL_0003AZ_0002 CGP 6:97210689-97252780
CIL_0003AY CIL_0003AY_0002 CGP 6:97238528-97617541

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005523 IEA tropomyosin binding
GO:0005575 ND cellular_component
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000420581 LMOD3-001 protein_coding Homo_sapiens 0 1435
ENST00000475434 LMOD3-004 protein_coding Homo_sapiens 0 1430
ENST00000489031 LMOD3-002 protein_coding Homo_sapiens 0 1430

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