C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6034
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097331 Gm6034-001 ENSMUSG00000073407 10090 + 17:36042961-36058645 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartLiverLungMuscleOvaryENSMUST00000097331
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Liver Lung Muscle Ovary
ENSMUST00000097331 0.083±0.02 0.176±0.10 0.036±0.00 0.106±0.00 0.052±0.02 0.035±0.00 0.088±0.03 0.096±0.00 0.035±0.00 0.107±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359635 HLA-B-001 protein_coding Homo_sapiens 1e-24 119
ENST00000418147 HLA-B-006 protein_coding Homo_sapiens 3e-24 117
ENST00000421349 HLA-B-001 protein_coding Homo_sapiens 6e-27 126
ENST00000425798 HLA-B-006 protein_coding Homo_sapiens 2e-21 108
ENST00000430299 HLA-B-003 protein_coding Homo_sapiens 7e-24 115
ENST00000435618 HLA-B-001 protein_coding Homo_sapiens 1e-23 115
ENST00000436729 HLA-B-006 protein_coding Homo_sapiens 3e-23 113
ENST00000437265 HLA-B-006 protein_coding Homo_sapiens 2e-26 124
ENST00000437866 HLA-B-003 protein_coding Homo_sapiens 3e-22 110
ENST00000445610 HLA-B-003 protein_coding Homo_sapiens 3e-27 126
ENST00000450871 HLA-B-001 protein_coding Homo_sapiens 6e-22 110
ENST00000463832 HLA-B-002 retained_intron Homo_sapiens 9e-29 132
ENST00000466304 HLA-B-003 retained_intron Homo_sapiens 5e-25 119
ENST00000469883 HLA-B-002 retained_intron Homo_sapiens 9e-24 115
ENST00000471639 HLA-B-004 nonsense_mediated_decay Homo_sapiens 4e-22 110
ENST00000479203 HLA-B-004 nonsense_mediated_decay Homo_sapiens 6e-25 119
ENST00000481283 HLA-B-004 nonsense_mediated_decay Homo_sapiens 8e-24 115
ENST00000489762 HLA-B-002 retained_intron Homo_sapiens 2e-25 121
ENST00000493512 HLA-B-002 retained_intron Homo_sapiens 1e-26 124
ENST00000498484 HLA-B-004 nonsense_mediated_decay Homo_sapiens 4e-27 126

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