C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine and glycine-rich protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097561 Csrp1-002 ENSMUSG00000026421 10090 + 1:135720061-135752232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000097561
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000097561 17.436±8.98 32.701±8.87 186.570±5.87 1.504±0.00 72.517±25.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005925 IEA focal adhesion
GO:0008270 IEA zinc ion binding
GO:0015629 TAS actin cytoskeleton
GO:0030036 TAS actin cytoskeleton organization
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340006 CSRP1-201 protein_coding Homo_sapiens 0 869
ENST00000367306 CSRP1-001 protein_coding Homo_sapiens 0 869
ENST00000458271 CSRP1-005 processed_transcript Homo_sapiens 0 568
ENST00000471596 CSRP1-003 retained_intron Homo_sapiens 0 383
ENST00000481851 CSRP1-002 retained_intron Homo_sapiens 2e-39 167
ENST00000524951 CSRP1-012 protein_coding Homo_sapiens 0 719
ENST00000526317 CSRP1-014 processed_transcript Homo_sapiens 0 228
ENST00000526723 CSRP1-013 protein_coding Homo_sapiens 0 571
ENST00000527573 CSRP1-017 processed_transcript Homo_sapiens 0 568
ENST00000527662 CSRP1-008 retained_intron Homo_sapiens 0 704
ENST00000529975 CSRP1-016 processed_transcript Homo_sapiens 0 562
ENST00000530120 CSRP1-011 processed_transcript Homo_sapiens 0 638
ENST00000531916 CSRP1-018 protein_coding Homo_sapiens 0 547
ENST00000532313 CSRP1-007 retained_intron Homo_sapiens 0 556
ENST00000532460 CSRP1-004 protein_coding Homo_sapiens 0 869
ENST00000533188 CSRP1-010 retained_intron Homo_sapiens 0 403
ENST00000533402 CSRP1-009 retained_intron Homo_sapiens 0 305
ENST00000533432 CSRP1-006 protein_coding Homo_sapiens 0 870

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