C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097651 Nol4-004 ENSMUSG00000041923 10090 - 18:22693634-23041653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000097651
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000097651 0.026±0.01 0.151±0.09 0.007±0.00 3.741±0.51 0.048±0.01 0.007±0.00 0.005±0.00 0.011±0.00 0.036±0.02 0.028±0.00 0.034±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PC CIL_0006PC_0002 CGP 18:22344883-23041653
CIL_0006PG CIL_0006PG_0002 CGP 18:22693181-23659714

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005730 IEA nucleolus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261592 NOL4-001 protein_coding Homo_sapiens 0 1884
ENST00000535384 NOL4-006 protein_coding Homo_sapiens 0 689
ENST00000538587 NOL4-005 protein_coding Homo_sapiens 0 1223
ENST00000586309 NOL4-009 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000586314 NOL4-004 nonsense_mediated_decay Homo_sapiens 0 1273
ENST00000586553 NOL4-014 protein_coding Homo_sapiens 0 749
ENST00000587953 NOL4-011 processed_transcript Homo_sapiens 0 401
ENST00000588280 NOL4-010 processed_transcript Homo_sapiens 0 691
ENST00000589544 NOL4-002 protein_coding Homo_sapiens 0 1810
ENST00000590712 NOL4-003 protein_coding Homo_sapiens 0 1760
ENST00000591917 NOL4-012 nonsense_mediated_decay Homo_sapiens 0 302

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