C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of variegation 4-20 homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098853 Suv420h2-001 ENSMUSG00000059851 10090 + 7:4740115-4747514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainTestisENSMUST00000098853
Transcript ID Adipose Brain Testis
ENSMUST00000098853 2.977±0.00 2.014±0.00 2.918±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000A7 CIL_0000A7_0002 CGP 7:4706832-4747514
CIL_0000A6 CIL_0000A6_0002 CGP 7:4740115-4753094

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000780 IDA condensed nuclear chromosome, centromeric region
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016571 IDA histone methylation
GO:0034770 IDA histone H4-K20 methylation
GO:0034773 IEA histone H4-K20 trimethylation
GO:0042799 IDA histone methyltransferase activity (H4-K20 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255613 SUV420H2-001 protein_coding Homo_sapiens 0 1236
ENST00000445196 SUV420H2-002 nonsense_mediated_decay Homo_sapiens 0 889
ENST00000460956 SUV420H2-006 processed_transcript Homo_sapiens 0 640
ENST00000464185 SUV420H2-005 retained_intron Homo_sapiens 0 211
ENST00000468951 SUV420H2-004 retained_intron Homo_sapiens 0 411
ENST00000474492 SUV420H2-007 retained_intron Homo_sapiens 0 361
ENST00000587442 SUV420H2-009 processed_transcript Homo_sapiens 0 412
ENST00000589338 SUV420H2-011 retained_intron Homo_sapiens 1.99993e-41 174
ENST00000592631 SUV420H2-010 nonsense_mediated_decay Homo_sapiens 0 647

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