C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099525 Ranbp6-201 ENSMUSG00000074909 10090 - 19:29808108-29812974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099525
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099525 2.617±0.62 1.375±0.37 4.724±0.22 5.685±2.43 2.372±0.59 1.405±0.26 2.157±0.41 1.645±0.13 2.493±0.93 2.810±0.28 2.222±0.29 2.638±1.27 2.285±0.79 8.803±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DB CIL_0001DB_0002 CGP 19:29808108-29960718

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259569 RANBP6-001 protein_coding Homo_sapiens 0 4606
ENST00000485372 RANBP6-002 protein_coding Homo_sapiens 0 1134
ENST00000545710 RP11-525E9.1-001 processed_pseudogene Homo_sapiens 0 2224
ENST00000623170 RANBP6-003 protein_coding Homo_sapiens 0 640

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