C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099937 Ccdc58-201 ENSMUSG00000075229 10090 + 16:36081275-36092118 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000099937
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000099937 5.042±0.00 2.502±0.00 13.880±3.29 26.539±18.21 5.211±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291458 CCDC58-001 protein_coding Homo_sapiens 0 604
ENST00000460810 CCDC58-006 processed_transcript Homo_sapiens 0 195
ENST00000466854 CCDC58-007 processed_transcript Homo_sapiens 5e-20 102
ENST00000479414 CCDC58-005 protein_coding Homo_sapiens 0 601
ENST00000479899 CCDC58-003 protein_coding Homo_sapiens 0 604
ENST00000497726 CCDC58-002 protein_coding Homo_sapiens 0 198
ENST00000498466 CCDC58-004 retained_intron Homo_sapiens 0 411
ENST00000536923 CCDC58P5-001 processed_pseudogene Homo_sapiens 0 442
ENST00000578567 CCDC58P1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000586642 C18orf61-004 processed_transcript Homo_sapiens 2e-33 147
ENST00000590792 CCDC58P3-001 processed_pseudogene Homo_sapiens 0 531
ENST00000592801 C18orf61-003 processed_transcript Homo_sapiens 1e-33 147

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