C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inverted formin, FH2 and WH2 domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101029 Inf2-201 ENSMUSG00000037679 10090 + 12:112588784-112615556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101029 8.666±2.56 9.782±0.90 8.948±1.82 1.303±0.20 7.629±3.49 8.491±2.39 2.255±0.61 1.366±0.20 4.737±2.43 7.092±0.57 1.280±0.66 9.458±5.45 26.082±17.57 0.481±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XC CIL_0006XC_0002 CGP 12:112588784-112641354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0032535 IMP regulation of cellular component size
GO:0048471 IEA perinuclear region of cytoplasm
GO:0090140 IEA regulation of mitochondrial fission

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252527 INF2-010 protein_coding Homo_sapiens 0 1670
ENST00000330634 INF2-003 protein_coding Homo_sapiens 0 1620
ENST00000392634 INF2-001 protein_coding Homo_sapiens 0 1781
ENST00000398337 INF2-009 protein_coding Homo_sapiens 0 815
ENST00000474229 INF2-006 retained_intron Homo_sapiens 0 612
ENST00000477497 INF2-008 retained_intron Homo_sapiens 0 407
ENST00000617571 INF2-201 protein_coding Homo_sapiens 0 1644

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