C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase B1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101376 Plb1-201 ENSMUSG00000029134 10090 + 5:32247351-32364356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000101376
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000101376 0.045±0.03 0.017±0.01 0.096±0.00 0.023±0.01 0.122±0.02 0.010±0.00 0.013±0.01 0.052±0.02 0.084±0.04 0.212±0.13 4.127±2.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QQ CIL_0007QQ_0002 VISTA 5:31765699-32367139
CIL_0009C6 CIL_0009C6_0002 VISTA 5:31765704-32367172
CIL_00013P CIL_00013P_0002 CGP 5:32136472-32366520
CIL_00013Q CIL_00013Q_0002 CGP 5:32232708-32517433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004622 IEA lysophospholipase activity
GO:0004623 IEA phospholipase A2 activity
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:2000344 IMP positive regulation of acrosome reaction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327757 PLB1-012 protein_coding Homo_sapiens 0 2595
ENST00000404858 PLB1-001 protein_coding Homo_sapiens 0 1770
ENST00000411743 PLB1-004 nonsense_mediated_decay Homo_sapiens 0 841
ENST00000422425 PLB1-201 protein_coding Homo_sapiens 0 1770
ENST00000444257 PLB1-005 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000479065 PLB1-009 retained_intron Homo_sapiens 1.99965e-42 176

Loading