C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deafness, autosomal dominant 5 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101405 Dfna5-002 ENSMUSG00000029821 10090 - 6:50200224-50261747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101405
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101405 0.136±0.05 1.245±0.10 1.050±0.23 0.358±0.12 0.627±0.10 0.243±0.04 0.396±0.09 0.371±0.16 0.117±0.07 1.310±0.73 0.366±0.14 0.574±0.39 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CT CIL_0002CT_0002 CGP 6:50110241-50263862
CIL_0002CS CIL_0002CS_0002 CGP 6:50189369-50456201

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007605 ISA sensory perception of sound
GO:0060113 IMP inner ear receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342947 DFNA5-001 protein_coding Homo_sapiens 0 745
ENST00000409775 DFNA5-003 protein_coding Homo_sapiens 0 745
ENST00000409970 DFNA5-005 protein_coding Homo_sapiens 0 532
ENST00000411476 DFNA5-008 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000414428 DFNA5-007 protein_coding Homo_sapiens 0 231
ENST00000419307 DFNA5-201 protein_coding Homo_sapiens 0 532
ENST00000473990 DFNA5-002 retained_intron Homo_sapiens 0 346
ENST00000493723 DFNA5-004 retained_intron Homo_sapiens 0 582

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