C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coronin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102493 Coro6-001 ENSMUSG00000020836 10090 + 11:77462411-77470484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102493
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102493 5.325±1.99 1.094±0.15 6.057±0.48 2.784±3.33 5.285±3.46 0.496±0.00 76.604±18.24 0.927±0.29 0.039±0.03 4.475±0.55 53.401±6.37 0.874±0.29 0.251±0.26 0.310±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000873 CIL_000873_0002 VISTA 11:77122469-77724441
CIL_0009BZ CIL_0009BZ_0002 VISTA 11:77122483-77724456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0015629 IBA actin cytoskeleton
GO:0030036 IBA actin cytoskeleton organization
GO:0051015 IBA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345068 CORO6-001 protein_coding Homo_sapiens 0 1766
ENST00000388767 CORO6-201 protein_coding Homo_sapiens 0 1760
ENST00000459686 CORO6-004 retained_intron Homo_sapiens 0 878
ENST00000467534 CORO6-005 retained_intron Homo_sapiens 0 730
ENST00000469090 CORO6-006 retained_intron Homo_sapiens 0 730
ENST00000480954 CORO6-002 nonsense_mediated_decay Homo_sapiens 0 730
ENST00000492276 CORO6-003 protein_coding Homo_sapiens 0 905
ENST00000580212 CORO6-008 protein_coding Homo_sapiens 0 885
ENST00000584602 CORO6-011 protein_coding Homo_sapiens 0 473
ENST00000584969 CORO6-009 protein_coding Homo_sapiens 0 1591

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