C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102720 Slc5a9-003 ENSMUSG00000028544 10090 - 4:111876273-111898769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102720
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102720 0.188±0.01 0.005±0.00 0.107±0.05 0.939±0.26 3.437±1.15 0.022±0.01 0.354±0.23 0.007±0.00 0.374±0.18 0.225±0.17 0.201±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006814 IEA sodium ion transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024433 slc5a9-001 protein_coding Danio_rerio 0 584
ENSDART00000141185 slc5a9-002 nonsense_mediated_decay Danio_rerio 0 224
ENST00000236495 SLC5A9-001 protein_coding Homo_sapiens 0 1676
ENST00000425816 SLC5A9-006 nonsense_mediated_decay Homo_sapiens 0 990
ENST00000438567 SLC5A9-004 protein_coding Homo_sapiens 0 1982
ENST00000493837 SLC5A9-002 retained_intron Homo_sapiens 0 1232
ENST00000525901 SLC5A9-010 processed_transcript Homo_sapiens 0 202
ENST00000527929 SLC5A9-009 retained_intron Homo_sapiens 0 381
ENST00000532322 SLC5A9-008 nonsense_mediated_decay Homo_sapiens 8e-24 115
ENST00000533824 SLC5A9-007 protein_coding Homo_sapiens 0 1676

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