C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), delta 2, regulatory subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102922 Pold2-001 ENSMUSG00000020471 10090 - 11:5872180-5878292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102922 19.388±5.09 19.905±1.75 12.128±2.54 19.051±11.86 15.364±3.55 23.558±2.21 11.240±1.99 12.792±0.81 22.327±12.85 15.054±0.72 14.472±1.19 31.604±11.57 11.453±5.21 16.121±6.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000IZ CIL_0000IZ_0002 CGP 11:5861947-5878292
CIL_0000J0 CIL_0000J0_0002 CGP 11:5872180-5898782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006261 IEA DNA-dependent DNA replication
GO:0043625 IEA delta DNA polymerase complex
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223361 POLD2-003 protein_coding Homo_sapiens 0 1399
ENST00000406581 POLD2-001 protein_coding Homo_sapiens 0 1705
ENST00000436844 POLD2-010 protein_coding Homo_sapiens 0 647
ENST00000452185 POLD2-002 protein_coding Homo_sapiens 0 1705
ENST00000489883 POLD2-016 retained_intron Homo_sapiens 0 315
ENST00000511220 POLD2P1-001 processed_pseudogene Homo_sapiens 0 1022
ENST00000610533 POLD2-201 protein_coding Homo_sapiens 0 1751

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