C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ovo-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103171 Ovol2-002 ENSMUSG00000037279 10090 - 2:144305175-144331695 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverOvaryPlacentaTestisENSMUST00000103171
Transcript ID Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000103171 2.554±0.00 0.260±0.00 0.046±0.03 0.468±0.30 10.452±4.90 3.864±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0002 VISTA 2:143876906-144478692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001525 IMP angiogenesis
GO:0001755 IMP neural crest cell migration
GO:0001842 IMP neural fold formation
GO:0001947 IMP heart looping
GO:0003677 IDA DNA binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007507 IMP heart development
GO:0008285 IMP negative regulation of cell proliferation
GO:0009913 IMP epidermal cell differentiation
GO:0009953 IMP dorsal/ventral pattern formation
GO:0010719 IMP negative regulation of epithelial to mesenchymal transition
GO:0010837 IMP regulation of keratinocyte proliferation
GO:0045617 ISS negative regulation of keratinocyte differentiation
GO:0045746 ISS negative regulation of Notch signaling pathway
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048557 IMP embryonic digestive tract morphogenesis
GO:0051726 ISS regulation of cell cycle
GO:0060214 IMP endocardium formation
GO:0060347 IMP heart trabecula formation
GO:0060716 IMP labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278780 OVOL2-001 protein_coding Homo_sapiens 0 734
ENST00000483661 OVOL2-003 processed_transcript Homo_sapiens 0 734
ENST00000486776 OVOL2-004 processed_transcript Homo_sapiens 0 241
ENST00000494030 OVOL2-005 processed_transcript Homo_sapiens 0 555

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