C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prominin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103214 Prom2-002 ENSMUSG00000027376 10090 - 2:127526955-127541385 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103214
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103214 0.098±0.02 11.882±0.95 0.064±0.00 2.824±0.66 0.009±0.00 0.017±0.00 1.644±0.32 0.380±0.24 0.498±0.24 0.058±0.03 0.268±0.07 2.119±2.32 1.698±0.99

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0005902 ISS microvillus
GO:0005929 ISS cilium
GO:0009986 IDA cell surface
GO:0015485 ISS cholesterol binding
GO:0031410 ISS cytoplasmic vesicle
GO:0044393 ISS microspike
GO:0045121 ISS membrane raft
GO:0071914 IDA prominosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317620 PROM2-201 protein_coding Homo_sapiens 0 1779
ENST00000317668 PROM2-001 protein_coding Homo_sapiens 0 1779
ENST00000403131 PROM2-002 protein_coding Homo_sapiens 0 1779
ENST00000431567 PROM2-005 nonsense_mediated_decay Homo_sapiens 0 1254
ENST00000478295 PROM2-008 retained_intron Homo_sapiens 0 287
ENST00000487138 PROM2-003 retained_intron Homo_sapiens 0 1171

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