C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin associated protein), alpha 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105440 Ctnna3-002 ENSMUSG00000060843 10090 + 10:63457510-65003667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000105440
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000105440 0.109±0.05 0.157±0.04 0.093±0.00 0.105±0.04 0.095±0.00 1.118±0.00 0.035±0.02 0.008±0.00 0.102±0.04 0.851±0.17 0.176±0.05 0.022±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005912 IDA adherens junction
GO:0005916 ISS fascia adherens
GO:0015629 IEA actin cytoskeleton
GO:0016337 IDA single organismal cell-cell adhesion
GO:0030027 IDA lamellipodium
GO:0045296 TAS cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000052441 ctnna1-001 protein_coding Danio_rerio 0 228
ENST00000330298 CTNNA3-003 protein_coding Homo_sapiens 0 640
ENST00000373735 CTNNA3-005 processed_transcript Homo_sapiens 0 1003
ENST00000433211 CTNNA3-001 protein_coding Homo_sapiens 0 3186

Loading