C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105872 Slc30a2-001 ENSMUSG00000028836 10090 + 4:134343466-134354477 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000105872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000105872 0.064±0.04 5.287±0.00 0.236±0.00 0.055±0.07 0.154±0.00 0.107±0.03 0.125±0.02 2.853±0.54 0.014±0.01 0.151±0.02 4.242±1.19 1.276±0.47 1.157±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008324 IEA cation transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374276 SLC30A2-004 protein_coding Homo_sapiens 0 979
ENST00000374278 SLC30A2-001 protein_coding Homo_sapiens 0 682

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