C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105874 Slc30a2-003 ENSMUSG00000028836 10090 + 4:134343206-134354484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000105874
Transcript ID Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000105874 8.228±4.10 0.193±0.06 0.148±0.10 0.040±0.00 2.424±0.24 0.178±0.00 4.644±1.36 2.213±0.97 12.814±6.10 5.174±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005770 IEA late endosome
GO:0006829 IEA zinc ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0061090 IEA positive regulation of sequestering of zinc ion
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374276 SLC30A2-004 protein_coding Homo_sapiens 0 979
ENST00000374278 SLC30A2-001 protein_coding Homo_sapiens 0 682

Loading