C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dehydrodolichyl diphosphate synthase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105887 Dhdds-003 ENSMUSG00000012117 10090 - 4:133970193-134000871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000105887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105887 4.036±1.25 4.272±0.84 4.146±0.00 4.269±0.00 2.968±0.14 3.445±0.76 1.876±0.22 3.197±0.51 3.696±0.44 1.343±0.25 5.338±1.85 5.238±1.19 2.629±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0002 VISTA 4:133429051-134030305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016765 IEA transferase activity, transferring alkyl or aryl (other than methyl) groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236342 DHDDS-011 protein_coding Homo_sapiens 0 1249
ENST00000360009 DHDDS-001 protein_coding Homo_sapiens 0 1491
ENST00000374185 DHDDS-005 protein_coding Homo_sapiens 0 684
ENST00000374186 DHDDS-004 retained_intron Homo_sapiens 0 346
ENST00000427245 DHDDS-006 protein_coding Homo_sapiens 0 686
ENST00000430232 DHDDS-008 protein_coding Homo_sapiens 0 448
ENST00000431933 DHDDS-012 protein_coding Homo_sapiens 0 573
ENST00000434391 DHDDS-002 nonsense_mediated_decay Homo_sapiens 0 1371
ENST00000436153 DHDDS-007 protein_coding Homo_sapiens 0 667
ENST00000525165 DHDDS-020 protein_coding Homo_sapiens 0 501
ENST00000525410 DHDDS-026 retained_intron Homo_sapiens 0 435
ENST00000525546 DHDDS-022 protein_coding Homo_sapiens 0 374
ENST00000525682 DHDDS-009 protein_coding Homo_sapiens 0 566
ENST00000526219 DHDDS-013 protein_coding Homo_sapiens 0 697
ENST00000526278 DHDDS-028 retained_intron Homo_sapiens 0 455
ENST00000528557 DHDDS-021 processed_transcript Homo_sapiens 0 448
ENST00000529688 DHDDS-029 retained_intron Homo_sapiens 0 422
ENST00000531312 DHDDS-015 protein_coding Homo_sapiens 0 523
ENST00000531955 DHDDS-027 processed_transcript Homo_sapiens 0 448
ENST00000533087 DHDDS-018 protein_coding Homo_sapiens 0 628

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