C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein family B (small), member 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106749 Hspb11-001 ENSMUSG00000063172 10090 + 4:107253903-107279938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106749
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106749 0.866±0.12 1.172±0.00 3.920±0.79 3.517±0.52 1.499±0.44 1.385±0.55 0.763±0.31 1.699±0.49 1.323±0.64 1.118±0.07 1.702±0.70 5.511±6.17 6.234±2.24 3.179±0.81

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 IMP skeletal system development
GO:0003674 ND molecular_function
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0006950 IEA response to stress
GO:0007155 IEA cell adhesion
GO:0007224 IMP smoothened signaling pathway
GO:0007507 IMP heart development
GO:0015031 IEA protein transport
GO:0030324 IMP lung development
GO:0030992 IDA intraciliary transport particle B
GO:0042073 IC intraciliary transport
GO:0046872 IEA metal ion binding
GO:0070986 IMP left/right axis specification

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000194214 HSPB11-001 protein_coding Homo_sapiens 0 521
ENST00000272139 C1orf35-001 protein_coding Homo_sapiens 0.000007 57
ENST00000371377 HSPB11-004 protein_coding Homo_sapiens 0 381
ENST00000371378 HSPB11-002 protein_coding Homo_sapiens 0 383
ENST00000469781 C1orf35-003 processed_transcript Homo_sapiens 0.00001 57
ENST00000472617 C1orf35-002 processed_transcript Homo_sapiens 0.00002 57
ENST00000485896 C1orf35-004 processed_transcript Homo_sapiens 0.000007 57
ENST00000489675 HSPB11-006 processed_transcript Homo_sapiens 0 289

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