C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107537 Ube3a-201 ENSMUSG00000025326 10090 + 7:59228752-59306727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107537 5.066±2.70 90.781±25.46 4.970±0.93 10.463±2.71 14.225±11.65 4.835±3.02 2.412±1.12 4.001±0.84 3.687±1.33 7.987±3.04 3.809±0.40 23.862±21.78 6.974±3.01 5.861±3.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OR CIL_0006OR_0002 CGP 7:58658202-59306727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 IMP ovarian follicle development
GO:0003713 IDA transcription coactivator activity
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0014068 IMP positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030521 IPI androgen receptor signaling pathway
GO:0035037 IMP sperm entry
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0051865 IEA protein autoubiquitination
GO:0060736 IMP prostate gland growth
GO:0070936 IEA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000078128 ube3a-001 protein_coding Danio_rerio 0 1160
ENST00000232165 UBE3A-201 protein_coding Homo_sapiens 0 4706
ENST00000397954 UBE3A-003 protein_coding Homo_sapiens 0 3812
ENST00000428984 UBE3A-004 protein_coding Homo_sapiens 0 3812
ENST00000429033 UBE3AP2-001 processed_pseudogene Homo_sapiens 0 2739
ENST00000438097 UBE3A-202 protein_coding Homo_sapiens 0 3812
ENST00000566215 UBE3A-002 protein_coding Homo_sapiens 0 3823
ENST00000604860 UBE3A-005 protein_coding Homo_sapiens 0 852
ENST00000614096 UBE3A-001 protein_coding Homo_sapiens 0 5144

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