C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SRC kinase signaling inhibitor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107596 Srcin1-001 ENSMUSG00000038453 10090 - 11:97509340-97575215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107596
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107596 0.152±0.07 0.135±0.00 20.308±7.24 0.202±0.03 0.153±0.09 2.099±1.08 0.019±0.01 0.480±0.00 0.092±0.05 3.096±0.00 0.202±0.00 1.590±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SQ CIL_0000SQ_0002 CGP 11:97509340-97629702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007162 IDA negative regulation of cell adhesion
GO:0014069 IEA postsynaptic density
GO:0015629 ISA actin cytoskeleton
GO:0019904 IEA protein domain specific binding
GO:0030027 IEA lamellipodium
GO:0030175 IEA filopodium
GO:0030334 IEA regulation of cell migration
GO:0030424 IEA axon
GO:0030425 IEA dendrite
GO:0034446 IEA substrate adhesion-dependent cell spreading
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0045202 IEA synapse
GO:0050709 IEA negative regulation of protein secretion
GO:0061001 IEA regulation of dendritic spine morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000612208 SRCIN1-007 retained_intron Homo_sapiens 0 856
ENST00000612431 SRCIN1-003 protein_coding Homo_sapiens 0 1635
ENST00000613116 SRCIN1-201 protein_coding Homo_sapiens 0 856
ENST00000615049 SRCIN1-202 protein_coding Homo_sapiens 0 4037
ENST00000617146 SRCIN1-001 protein_coding Homo_sapiens 0 4037
ENST00000621492 SRCIN1-002 protein_coding Homo_sapiens 0 4907
ENST00000621763 SRCIN1-004 processed_transcript Homo_sapiens 0 3637
ENST00000622190 SRCIN1-006 protein_coding Homo_sapiens 0 3323
ENST00000622519 SRCIN1-005 retained_intron Homo_sapiens 0 3458

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