C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ets variant 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108147 Etv2-001 ENSMUSG00000006311 10090 - 7:30633616-30635852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverPlacentaTestisENSMUST00000108147
Transcript ID Brain Colon Liver Placenta Testis
ENSMUST00000108147 0.007±0.00 0.042±0.00 0.018±0.02 0.041±0.03 3.491±0.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001701 IMP in utero embryonic development
GO:0001707 IDA mesoderm formation
GO:0001824 IMP blastocyst development
GO:0001890 IMP placenta development
GO:0005634 IBA nucleus
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007219 IDA Notch signaling pathway
GO:0010628 IDA positive regulation of gene expression
GO:0016055 IDA Wnt signaling pathway
GO:0030097 IDA hemopoiesis
GO:0030218 IMP erythrocyte differentiation
GO:0045603 IDA positive regulation of endothelial cell differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048514 IMP blood vessel morphogenesis
GO:0060803 IDA BMP signaling pathway involved in mesodermal cell fate specification
GO:2000382 IDA positive regulation of mesoderm development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281428 FLI1-201 protein_coding Homo_sapiens 0.0000000000003 82
ENST00000344954 FLI1-202 protein_coding Homo_sapiens 0.0000000000003 82
ENST00000379023 ETV2-007 protein_coding Homo_sapiens 0 344
ENST00000379026 ETV2-003 protein_coding Homo_sapiens 0 545
ENST00000402764 ETV2-201 protein_coding Homo_sapiens 0 604
ENST00000403402 ETV2-004 protein_coding Homo_sapiens 0 604
ENST00000429175 FLI1-002 nonsense_mediated_decay Homo_sapiens 0.0000000000003 82
ENST00000479824 ETV2-001 protein_coding Homo_sapiens 0 545
ENST00000527786 FLI1-001 protein_coding Homo_sapiens 0.0000000000003 82
ENST00000528790 FLI1-006 retained_intron Homo_sapiens 0.0000000000004 82
ENST00000534087 FLI1-003 protein_coding Homo_sapiens 0.0000000000003 82
ENST00000591135 ETV2-008 protein_coding Homo_sapiens 0 220
ENST00000608303 FLI1-004 nonsense_mediated_decay Homo_sapiens 0.0000000000002 82
ENST00000619399 ETV2-202 protein_coding Homo_sapiens 8e-34 148
ENST00000621247 ETV2-203 protein_coding Homo_sapiens 0 381

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