C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 interacting factor homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108238 Yif1b-002 ENSMUSG00000030588 10090 + 7:29238329-29247529 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108238 32.100±3.82 27.684±9.69 10.573±0.00 13.001±0.83 37.425±5.30 29.561±7.97 18.161±4.63 50.783±7.83 13.529±6.82 39.123±3.81 6.449±2.48 38.900±17.47 17.086±5.00 20.367±4.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329420 YIF1B-010 protein_coding Homo_sapiens 0 1007
ENST00000337679 YIF1B-002 protein_coding Homo_sapiens 0 891
ENST00000339413 YIF1B-001 protein_coding Homo_sapiens 0 1020
ENST00000392124 YIF1B-006 protein_coding Homo_sapiens 0 1011
ENST00000585563 YIF1B-014 retained_intron Homo_sapiens 0 737
ENST00000586319 YIF1B-016 retained_intron Homo_sapiens 0 399
ENST00000589151 YIF1B-017 retained_intron Homo_sapiens 0.00000001 64
ENST00000589247 YIF1B-012 protein_coding Homo_sapiens 0 795
ENST00000589644 YIF1B-005 retained_intron Homo_sapiens 0 292
ENST00000591755 YIF1B-003 protein_coding Homo_sapiens 0 889
ENST00000591784 YIF1B-011 protein_coding Homo_sapiens 0 1007
ENST00000592246 YIF1B-015 protein_coding Homo_sapiens 0 669
ENST00000592694 YIF1B-004 protein_coding Homo_sapiens 0 1055

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