C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: epithelial splicing regulatory protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108311 Esrp1-201 ENSMUSG00000040728 10090 - 4:11332038-11386783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonKidneyLungOvaryPlacentaTestisENSMUST00000108311
Transcript ID Adipose Bladder Breast Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000108311 3.437±0.13 3.747±0.55 3.028±0.46 17.175±2.07 1.493±0.17 4.589±0.60 2.480±0.50 6.060±1.06 0.752±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BS CIL_0002BS_0002 CGP 4:11331933-11550684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 ISS mRNA binding
GO:0005634 ISS nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358397 ESRP1-002 protein_coding Homo_sapiens 0 2988
ENST00000423620 ESRP1-003 protein_coding Homo_sapiens 0 2796
ENST00000433389 ESRP1-001 protein_coding Homo_sapiens 0 3121
ENST00000454170 ESRP1-004 protein_coding Homo_sapiens 0 2492
ENST00000517556 ESRP1-011 retained_intron Homo_sapiens 0 442
ENST00000517610 ESRP1-006 protein_coding Homo_sapiens 0 2002
ENST00000519505 ESRP1-005 protein_coding Homo_sapiens 0 1768
ENST00000520385 ESRP1-008 protein_coding Homo_sapiens 0 464
ENST00000522756 ESRP1-009 protein_coding Homo_sapiens 0 473
ENST00000522920 ESRP1-010 retained_intron Homo_sapiens 0 254
ENST00000523347 ESRP1-007 processed_transcript Homo_sapiens 0 261

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