C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: epithelial splicing regulatory protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108313 Esrp1-001 ENSMUSG00000040728 10090 - 4:11331933-11386783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLungOvaryPlacentaTestisENSMUST00000108313
Transcript ID Bladder Breast Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000108313 6.276±1.19 1.701±0.57 11.212±3.36 1.822±0.28 1.974±0.30 1.705±0.49 4.174±0.60 0.811±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BS CIL_0002BS_0002 CGP 4:11331933-11550684

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 ISS mRNA binding
GO:0005634 ISS nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0043484 ISS regulation of RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358397 ESRP1-002 protein_coding Homo_sapiens 0 2471
ENST00000423620 ESRP1-003 protein_coding Homo_sapiens 0 2593
ENST00000433389 ESRP1-001 protein_coding Homo_sapiens 0 2471
ENST00000454170 ESRP1-004 protein_coding Homo_sapiens 0 2547
ENST00000517556 ESRP1-011 retained_intron Homo_sapiens 0 442
ENST00000517610 ESRP1-006 protein_coding Homo_sapiens 0 1666
ENST00000519505 ESRP1-005 protein_coding Homo_sapiens 0 1692
ENST00000520385 ESRP1-008 protein_coding Homo_sapiens 0 464
ENST00000522756 ESRP1-009 protein_coding Homo_sapiens 0 473
ENST00000522920 ESRP1-010 retained_intron Homo_sapiens 0 254
ENST00000523347 ESRP1-007 processed_transcript Homo_sapiens 0 285

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